Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold3141
Parameters: 2 7 7 80 10 50 1000
Length:  46812

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2106--2219
51
2.2
51
95
0
201
28
23
14
33
1.94
9894--10007
51
2.2
51
93
0
192
28
22
14
34
1.93
10443--11178
361
2.0
361
96
0
1337
32
17
10
39
1.83
13679--13970
89
3.3
88
70
7
248
29
17
21
31
1.96
13590--14018
178
2.4
178
87
0
599
28
18
21
31
1.97
13742--13964
45
5.0
45
67
11
118
30
17
20
32
1.95
13946--14310
143
2.6
143
87
1
527
28
22
18
30
1.97
14179--14400
89
2.5
89
85
2
268
27
22
18
31
1.98
14179--14384
45
4.6
45
76
4
175
25
23
18
31
1.98
14785--14930
46
3.2
46
87
1
204
23
26
15
33
1.95
15365--15414
25
2.0
25
96
0
91
62
8
10
20
1.52
15776--15814
19
2.1
19
85
4
53
2
15
2
79
0.95
15783--15828
19
2.3
20
85
3
58
0
10
4
84
0.75
15782--15828
20
2.3
20
85
7
60
0
10
4
85
0.74
16331--16361
10
3.1
10
90
0
53
0
0
12
87
0.55
19070--19237
83
2.0
83
95
0
300
14
19
16
48
1.81
19395--19433
19
2.0
20
90
5
62
41
12
23
23
1.88
26271--26336
31
2.1
31
91
0
105
50
18
4
27
1.66
36539--36787
124
2.0
124
100
0
498
42
16
8
32
1.79
36833--37164
110
3.0
111
99
0
657
34
23
9
32
1.87
43324--43364
21
2.0
21
90
0
64
19
29
21
29
1.98

Tables:   1

The End!