Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1021
Parameters: 2 7 7 80 10 50 1000
Length:  44370

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3628--3723
40
2.4
39
83
10
124
25
23
23
27
2.00
3628--3762
39
3.5
38
77
11
116
23
22
24
28
1.99
14172--14330
39
4.1
39
89
1
230
22
29
20
27
1.98
24650--25345
145
4.9
143
94
1
1157
29
29
8
32
1.86
24650--25345
192
3.6
190
94
1
1153
29
29
8
32
1.86
24650--25345
47
14.6
47
93
1
1104
29
29
8
32
1.86
28271--28335
28
2.3
28
89
5
96
35
27
6
30
1.81
28441--28530
28
3.2
27
86
10
112
20
23
23
33
1.97
28441--28555
55
2.1
56
82
11
139
19
23
21
35
1.96
29540--29585
17
2.6
18
86
6
67
52
4
8
34
1.52
30375--30406
15
2.1
15
94
0
55
40
18
21
18
1.91
33226--33345
56
2.1
56
96
0
222
45
8
23
22
1.79
34472--34655
40
4.6
39
80
9
194
23
22
29
24
1.99
34472--34688
79
2.7
79
75
14
214
25
22
28
24
1.99
41835--41972
38
3.6
38
75
14
115
25
28
21
25
1.99
41861--41966
37
2.8
38
80
8
108
26
28
18
26
1.98
43138--43257
57
2.1
55
92
6
197
23
23
9
44
1.82

Tables:   1

The End!