Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1213
Parameters: 2 7 7 80 10 50 1000
Length:  44375

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4672--4849
27
6.6
27
84
3
205
29
28
15
26
1.96
4693--4848
82
1.9
81
88
3
233
29
28
15
26
1.96
12857--13034
27
6.6
27
84
3
205
29
28
15
26
1.96
12878--13033
82
1.9
81
88
3
233
29
28
15
26
1.96
20397--20572
46
3.8
46
78
11
189
21
20
28
29
1.98
20394--20565
93
1.8
93
92
2
292
21
20
29
28
1.98
26502--26676
46
3.8
44
80
11
192
20
20
29
29
1.97
26499--26669
92
1.9
92
93
0
297
20
21
29
28
1.98
31827--32009
100
1.8
100
93
0
321
29
27
18
24
1.98
31835--32016
49
3.7
49
79
5
213
29
27
18
25
1.98
33565--33869
45
6.8
44
83
7
296
46
13
18
21
1.82
33565--33871
90
3.4
89
83
7
340
46
13
17
21
1.82
33565--33876
135
2.3
134
81
6
344
46
13
17
22
1.82
34223--34252
13
2.3
13
94
0
51
43
0
10
46
1.37
37857--37945
28
3.1
28
78
12
83
26
26
15
30
1.96
42243--42371
29
4.5
29
86
2
172
28
29
12
29
1.93
42243--42371
58
2.2
59
89
4
192
28
29
12
29
1.93
42243--42387
58
2.5
58
85
3
186
28
30
11
28
1.92
43817--43855
16
2.4
16
86
4
51
12
2
33
51
1.54

Tables:   1

The End!