Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold3198
Parameters: 2 7 7 80 10 50 1000
Length:  40475

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3035--3112
29
2.7
28
82
11
95
25
15
29
29
1.96
5278--5613
168
2.0
168
99
0
663
31
14
19
34
1.92
7875--8264
47
8.3
47
93
1
640
31
8
29
29
1.88
8073--8200
46
2.9
40
97
1
130
33
9
28
28
1.88
8383--8461
37
2.1
37
86
4
106
24
20
30
25
1.98
13983--14015
13
2.6
13
90
4
50
48
12
0
39
1.40
15240--15298
29
2.0
29
100
0
118
40
13
10
35
1.78
16972--17020
6
8.3
6
93
4
82
81
0
2
16
0.78
18026--18070
21
2.2
20
88
4
63
17
26
26
28
1.98
21452--21484
13
2.6
13
90
4
50
48
12
0
39
1.40
25097--25175
40
2.0
40
84
0
104
26
11
25
36
1.90
31804--31882
28
2.8
28
96
0
149
32
11
26
29
1.91

Tables:   1

The End!