Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2887
Parameters: 2 7 7 80 10 50 1000
Length:  39581

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3958--4004
20
2.3
20
85
0
67
21
12
36
29
1.91
5649--5754
48
2.2
48
85
9
137
14
24
1
59
1.45
6772--6889
12
9.2
12
73
13
67
12
9
3
74
1.18
6830--6879
14
3.5
14
75
5
55
16
6
4
74
1.17
10127--10197
29
2.5
28
75
18
76
67
0
18
14
1.23
16275--16300
11
2.4
11
100
0
52
30
0
11
57
1.34
24320--24356
11
3.4
11
100
0
74
16
0
8
75
1.02
26221--26279
10
5.7
10
78
7
64
30
33
3
32
1.74
26201--26351
21
7.0
21
80
9
169
34
32
3
29
1.76
26233--26387
67
2.3
67
92
4
251
37
32
3
25
1.74
27469--27502
15
2.3
15
89
0
50
35
29
32
2
1.73
31184--31245
10
5.9
10
74
10
52
33
32
3
30
1.74
31184--31246
21
3.0
21
88
2
90
33
33
3
30
1.74
34082--34109
4
7.0
4
100
0
56
25
0
0
75
0.81

Tables:   1

The End!