Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1950
Parameters: 2 7 7 80 10 50 1000
Length:  33005

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
670--703
18
2.0
16
88
11
50
52
11
0
35
1.38
3498--3530
6
5.5
6
86
13
50
3
18
12
66
1.36
9266--9378
38
2.9
38
86
2
145
23
24
26
25
2.00
9282--9389
38
2.8
38
88
0
153
21
24
26
27
1.99
9361--9493
43
3.1
43
91
2
198
12
24
32
30
1.93
11022--11125
48
2.2
48
81
10
115
30
22
29
17
1.96
15883--15982
37
2.7
38
88
3
148
21
24
27
28
1.99
15961--16060
43
2.5
42
82
8
118
13
24
35
28
1.92
15980--16060
43
1.9
42
89
2
126
12
24
34
28
1.92
21686--21910
40
5.7
40
84
5
269
25
27
21
24
1.99
21686--21910
79
2.8
80
86
6
296
25
27
21
24
1.99
21686--21910
119
1.9
120
84
6
305
25
27
21
24
1.99
24196--24307
37
2.9
38
80
5
109
23
23
25
27
2.00
24312--24420
43
2.6
43
95
1
193
10
26
33
30
1.89
31397--31585
55
3.5
53
85
5
245
21
24
19
34
1.96
31572--31689
46
2.6
46
90
6
188
26
23
14
35
1.93

Tables:   1

The End!