Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold3585
Parameters: 2 7 7 80 10 50 1000
Length:  44219

Tables:   1   

This is table  1  of  1  ( 38 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
42--92
19
2.7
19
81
0
66
21
0
3
74
0.98
41--93
20
2.8
20
86
11
76
24
0
3
71
1.02
202--238
19
2.0
19
89
5
58
27
0
0
72
0.84
202--253
22
2.4
22
81
9
63
26
1
0
71
0.97
279--331
23
2.3
23
83
9
63
30
3
0
66
1.10
297--368
23
3.2
23
79
16
71
29
2
0
68
1.04
509--729
10
22.0
10
68
16
68
23
3
0
72
1.05
625--663
18
2.2
18
85
0
51
17
0
2
79
0.84
584--634
1
51.0
1
92
0
84
3
0
0
96
0.24
647--712
23
2.8
24
77
11
82
33
1
0
65
1.02
665--725
19
3.0
20
83
11
63
34
3
0
62
1.12
638--730
40
2.3
41
76
10
102
33
2
0
64
1.06
637--745
54
2.0
53
80
15
118
33
2
0
62
1.16
3503--3729
40
5.7
40
95
1
402
30
19
27
22
1.98
3503--3731
119
1.9
120
93
0
379
31
19
27
22
1.98
3503--3729
79
2.8
80
94
1
402
30
19
27
22
1.98
6504--6816
40
7.8
40
89
0
455
25
26
21
26
2.00
8083--8253
37
4.6
37
94
0
281
25
29
19
25
1.98
8422--8746
47
7.0
47
92
1
528
25
28
12
33
1.92
17925--18078
74
2.1
75
95
1
274
42
13
8
35
1.75
18328--18561
55
4.4
53
78
9
237
35
17
24
22
1.95
18335--18535
108
1.8
110
86
4
291
33
17
25
23
1.96
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
19097--19168
34
2.1
34
92
2
119
22
26
19
31
1.97
22893--22940
19
2.5
19
82
0
60
39
16
18
25
1.91
27241--27361
42
2.8
43
78
5
129
24
21
26
27
1.99
27241--27361
43
2.8
42
79
7
111
24
21
26
27
1.99
29015--29087
34
2.2
34
87
7
105
26
21
24
27
2.00
29015--29118
34
3.1
34
82
6
97
24
22
25
27
1.99
36547--36731
40
4.6
39
81
5
194
25
22
27
25
2.00
36600--36764
79
2.1
79
81
8
185
27
20
26
25
1.99
38124--38201
36
2.1
37
88
2
113
25
30
19
24
1.98
38316--38828
47
10.9
47
94
3
867
29
30
8
31
1.87
38316--38828
93
5.5
94
93
4
867
29
30
8
31
1.87
38316--38828
140
3.6
141
93
4
867
29
30
8
31
1.87
42225--42633
40
10.5
39
88
6
548
26
28
21
23
1.99
42225--42633
158
2.6
156
88
7
582
26
28
21
23
1.99
44033--44218
47
3.9
47
90
3
268
28
31
9
30
1.89
44031--44218
96
2.0
93
88
5
279
28
31
9
30
1.89

Tables:   1

The End!