Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1092
Parameters: 2 7 7 80 10 50 1000
Length:  31558

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1588--1687
27
3.7
26
79
12
96
36
17
25
22
1.95
6002--6054
26
2.0
26
100
0
106
32
33
15
18
1.92
8392--8438
21
2.4
19
82
10
58
46
23
2
27
1.63
9782--9845
30
2.2
29
94
2
110
34
21
17
26
1.95
11121--11174
27
2.0
27
85
0
72
38
7
14
38
1.75
11419--11614
50
3.9
50
81
2
232
26
18
26
28
1.98
14329--14386
7
8.4
7
88
3
82
17
0
39
43
1.49
14334--14385
27
1.9
27
92
0
86
17
0
36
46
1.48
16531--16973
50
8.7
50
75
6
329
30
25
18
25
1.98
16534--16922
101
3.8
101
72
7
254
29
25
18
25
1.98
16534--16975
151
2.9
149
84
3
551
30
25
18
25
1.98
22128--22272
40
3.6
39
89
4
209
28
27
20
22
1.99
29455--29678
118
1.9
120
83
7
296
25
27
21
24
1.99
29455--29678
40
5.7
40
86
7
287
25
27
21
24
1.99

Tables:   1

The End!