Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2826
Parameters: 2 7 7 80 10 50 1000
Length:  89574

Tables:   1   

This is table  1  of  1  ( 23 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8991--9045
16
3.4
16
84
0
74
41
5
20
32
1.75
17755--17796
21
2.0
21
90
0
66
42
23
11
21
1.86
20366--20443
39
2.0
39
100
0
156
43
20
23
12
1.86
27046--27089
22
2.0
21
83
12
54
27
6
20
45
1.76
28673--28718
23
2.0
23
82
0
56
17
17
17
47
1.83
47049--47094
21
2.2
20
85
11
58
65
4
0
30
1.12
52773--52843
31
2.3
32
76
11
76
54
18
4
22
1.60
53288--53354
31
2.2
31
83
0
80
28
16
17
37
1.92
70400--70443
23
2.0
23
86
4
63
56
2
6
34
1.38
71773--71801
15
2.0
15
93
6
51
0
17
6
75
1.01
80627--80719
39
2.5
37
80
7
98
27
29
22
20
1.98
81075--81119
3
15.0
3
80
0
54
57
6
0
35
1.25
81075--81121
18
2.6
18
93
0
76
55
8
0
36
1.31
81079--81119
12
3.4
12
93
0
64
56
7
0
36
1.27
81825--81864
20
2.0
20
85
9
55
2
15
5
77
1.04
81995--82062
31
2.3
28
78
9
73
41
2
1
54
1.24
82041--82079
21
1.9
20
84
5
51
46
2
0
51
1.14
87868--87960
39
2.5
37
80
7
98
27
29
22
20
1.98
88103--88172
23
2.9
24
79
12
72
34
21
0
44
1.53
88312--88356
3
15.0
3
85
0
63
60
4
0
35
1.17
89056--89095
20
2.0
20
85
9
55
2
15
5
77
1.04
89266--89310
19
2.5
18
82
7
56
48
2
0
48
1.13
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
89266--89315
20
2.6
19
83
3
64
50
2
0
48
1.12

Tables:   1

The End!