Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2382
Parameters: 2 7 7 80 10 50 1000
Length:  87864

Tables:   1   

This is table  1  of  1  ( 36 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2879--2949
35
2.0
35
86
8
99
61
2
5
29
1.33
2936--3032
28
3.5
26
76
14
72
64
2
2
30
1.16
2934--2984
16
2.8
18
80
14
52
64
3
0
31
1.11
2956--3042
28
3.2
28
76
15
76
65
1
3
29
1.16
2934--3042
19
5.8
19
71
15
68
64
1
2
31
1.18
3395--3477
9
9.1
10
69
22
51
34
3
0
61
1.13
3392--3465
18
4.2
18
75
14
73
35
4
0
60
1.15
3395--3465
17
4.1
17
77
16
74
33
4
0
61
1.15
3409--3473
28
2.3
27
82
12
78
35
4
0
60
1.18
6115--6143
13
2.2
13
100
0
58
34
10
6
48
1.64
9578--9605
10
2.8
10
100
0
56
0
10
17
71
1.14
28887--28912
11
2.4
11
100
0
52
80
0
0
19
0.71
30570--30718
41
3.6
41
91
0
244
30
21
23
24
1.99
30570--30811
82
2.9
82
82
4
254
27
20
22
29
1.98
30692--30846
42
3.7
43
78
9
124
22
18
25
34
1.96
30692--30846
85
1.8
85
83
1
204
22
18
25
34
1.96
33083--33107
11
2.3
11
100
0
50
32
0
8
60
1.26
37296--37345
26
1.9
26
84
8
66
58
16
6
20
1.59
41161--41380
101
2.2
100
82
8
266
26
16
25
30
1.96
41191--41381
51
3.8
51
84
4
244
25
16
26
31
1.97
41524--41567
23
1.9
22
82
17
54
38
0
25
36
1.56
44010--44259
127
2.0
127
94
0
437
20
11
16
52
1.74
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
47052--47692
320
2.0
320
100
0
1282
25
9
26
38
1.86
47850--48015
55
3.0
55
62
19
128
20
22
31
24
1.98
49530--49737
40
5.2
40
89
0
317
35
16
32
15
1.91
49533--49737
20
10.3
19
69
11
115
34
17
33
15
1.91
52524--52586
27
2.3
27
86
0
90
36
19
12
31
1.89
58268--58324
24
2.3
25
85
8
82
35
3
0
61
1.13
60542--60613
25
2.9
25
78
15
71
33
1
4
61
1.24
63474--63560
18
4.7
18
75
12
86
51
14
4
28
1.62
63472--63577
38
2.8
38
83
9
112
52
15
4
27
1.62
78425--78608
39
4.6
41
82
11
206
24
22
27
25
2.00
78425--78608
79
2.3
80
83
8
225
24
22
27
25
2.00
78478--78641
78
2.1
79
83
7
201
26
21
27
25
1.99
86357--86538
40
4.6
41
76
16
188
25
23
27
23
2.00
86419--86571
81
1.9
79
82
6
191
27
20
26
24
1.99

Tables:   1

The End!