Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold3021
Parameters: 2 7 7 80 10 50 1000
Length:  43739

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
37--87
1
51.0
1
92
0
84
0
0
3
96
0.24
37--87
25
2.0
25
100
0
102
0
0
3
96
0.24
605--677
37
2.0
37
92
5
123
53
5
19
21
1.65
7944--8093
67
2.2
67
81
8
171
32
17
28
21
1.96
7968--8151
67
2.8
64
77
8
194
29
17
29
22
1.97
10667--10718
20
2.7
20
82
14
56
38
23
0
38
1.55
13833--13858
10
2.6
10
100
0
52
65
7
0
26
1.20
13756--13913
52
3.0
52
91
5
257
62
4
0
32
1.19
14421--14455
17
2.0
18
88
5
54
37
5
0
57
1.23
17530--17560
13
2.4
13
100
0
62
54
0
0
45
0.99
21037--21080
23
1.9
23
81
9
54
40
2
4
52
1.34
27149--27641
47
10.3
47
92
2
745
33
8
29
29
1.86
27149--27641
96
5.1
94
91
3
745
33
8
29
29
1.86
31940--32111
93
1.8
93
94
0
308
27
30
21
20
1.98
31933--32108
46
3.8
46
79
12
207
28
30
21
19
1.98
39495--39669
47
3.8
47
78
7
196
28
29
21
21
1.99

Tables:   1

The End!