Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2822
Parameters: 2 7 7 80 10 50 1000
Length:  63700

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1442--1488
11
4.2
11
94
5
85
70
8
0
21
1.14
1445--1486
12
3.6
12
96
3
77
78
7
0
14
0.95
1445--1488
23
1.9
23
100
0
88
75
6
0
18
1.02
1528--1566
16
2.4
16
100
0
78
69
5
10
15
1.34
4332--4378
20
2.3
20
81
0
58
23
12
34
29
1.92
8457--8509
23
2.4
22
76
20
56
9
18
1
69
1.25
17261--17287
10
2.7
10
100
0
54
77
7
0
14
0.97
17233--17289
13
4.6
13
82
12
75
75
7
1
15
1.10
17333--17401
28
2.5
28
88
7
104
73
2
13
10
1.19
19305--19343
15
2.4
15
87
12
51
66
2
20
10
1.33
25150--25202
23
2.4
22
76
20
56
9
18
1
69
1.25
35501--35556
15
3.7
15
92
7
96
58
1
12
26
1.44
36472--36517
17
2.6
18
74
19
51
71
4
19
4
1.20
44863--44890
4
7.0
4
100
0
56
75
0
0
25
0.81
46202--46254
23
2.4
22
76
20
56
9
18
1
69
1.25
48597--48629
4
8.0
4
93
6
57
75
0
0
24
0.80
49945--49985
16
2.7
15
85
7
55
78
2
12
7
1.06
51797--51854
30
1.9
30
100
0
116
36
27
8
27
1.86
53125--53187
21
3.0
21
88
2
81
33
31
4
30
1.78
54296--54329
15
2.3
15
89
0
50
35
29
32
2
1.73
59593--59797
27
7.6
27
83
3
223
26
15
29
29
1.96
59594--59797
54
3.8
54
84
3
257
25
15
29
29
1.96

Tables:   1

The End!