Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold391
Parameters: 2 7 7 80 10 50 1000
Length:  59996

Tables:   1   

This is table  1  of  1  ( 27 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4326--4363
15
2.6
15
91
4
60
10
0
36
52
1.36
4414--4539
34
3.7
32
79
11
119
38
1
14
45
1.54
8711--8766
19
2.8
19
89
5
85
41
10
12
35
1.78
11247--11527
140
2.0
140
100
0
562
38
11
18
31
1.86
13355--13412
31
2.0
30
90
10
93
29
13
18
37
1.90
13848--13897
17
2.7
20
78
18
70
10
0
44
46
1.37
18477--18526
17
2.7
20
78
18
70
10
0
44
46
1.37
23765--23882
34
3.5
34
78
5
105
38
2
14
44
1.59
25036--25073
16
2.4
16
90
0
58
55
10
5
28
1.56
27013--27125
40
2.8
41
74
4
106
38
22
20
19
1.94
27384--27476
41
2.3
40
81
3
114
20
22
25
31
1.98
27943--30321
792
3.0
793
96
1
4348
33
9
18
39
1.82
30722--30752
16
1.9
16
93
0
53
35
25
6
32
1.82
32712--32753
16
2.6
17
85
10
54
47
4
4
42
1.45
35035--35072
15
2.6
15
91
4
60
10
0
36
52
1.36
35123--35248
34
3.7
32
79
11
119
38
1
14
45
1.54
39418--39473
19
2.8
19
89
5
85
41
10
12
35
1.78
41955--42235
140
2.0
140
100
0
562
38
11
18
31
1.86
44064--44121
31
2.0
30
90
10
93
29
13
18
37
1.90
47125--47151
2
13.5
2
100
0
54
48
0
0
51
1.00
49387--49504
34
3.5
34
78
5
105
38
2
14
44
1.59
50658--50695
16
2.4
16
90
0
58
55
10
5
28
1.56
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
52635--52747
40
2.8
41
74
4
106
38
22
20
19
1.94
53007--53099
41
2.3
40
83
3
123
20
23
25
30
1.99
55392--55427
18
1.9
18
88
5
54
66
0
0
33
0.92
55546--55576
16
1.9
16
93
0
53
35
25
6
32
1.82
57779--57904
31
3.8
33
74
7
112
41
2
13
42
1.57

Tables:   1

The End!