Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold3618
Parameters: 2 7 7 80 10 50 1000
Length:  48769

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2144--2184
17
2.5
17
96
4
75
21
12
2
63
1.40
3878--3915
16
2.5
15
87
8
58
7
7
2
81
0.96
7909--7959
26
1.9
27
84
4
68
64
1
25
7
1.31
8997--9654
327
2.0
327
96
0
1210
36
21
18
23
1.95
11641--11668
9
3.1
9
100
0
56
35
10
21
32
1.88
14375--14447
29
2.5
29
90
0
119
30
9
13
46
1.75
20383--20420
10
3.7
10
92
3
58
76
5
7
10
1.15
20382--20421
11
3.7
11
90
6
64
77
5
7
10
1.11
20404--20437
13
2.7
13
95
4
61
73
0
5
20
1.04
28800--28840
11
3.5
11
87
9
55
9
9
4
75
1.17
30326--30390
20
3.3
19
73
16
51
38
15
21
24
1.92
36006--36066
10
6.1
10
74
12
54
32
13
24
29
1.93
36007--36067
20
3.0
20
83
9
79
32
13
26
27
1.93
39866--39899
15
2.3
15
90
10
52
82
5
0
11
0.83
39866--39899
16
2.2
15
89
5
50
82
5
0
11
0.83
39863--39915
27
2.0
27
88
3
81
75
5
3
15
1.13
39863--39918
26
2.1
26
86
6
76
73
5
3
17
1.17

Tables:   1

The End!