Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2106
Parameters: 2 7 7 80 10 50 1000
Length:  43588

Tables:   1   

This is table  1  of  1  ( 26 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4178--4206
1
29.0
1
100
0
58
0
0
0
100
0.00
4250--4302
12
4.0
13
80
11
63
15
5
1
77
1.04
4249--4300
25
2.0
27
88
7
81
15
7
1
75
1.12
4567--4644
21
3.4
23
74
8
70
26
2
30
39
1.70
4603--4669
21
3.1
21
82
4
80
29
2
32
34
1.73
13422--13469
12
4.2
11
84
10
69
22
2
6
68
1.23
13422--13469
23
2.1
23
92
0
78
22
2
6
68
1.23
14460--14506
23
2.1
23
84
7
62
51
12
4
31
1.59
15563--15618
18
2.9
18
80
12
67
5
12
5
76
1.12
16729--16756
10
2.8
10
100
0
56
10
0
7
82
0.85
18331--18395
20
3.3
19
73
16
51
38
16
21
23
1.93
20171--20233
33
1.9
33
84
12
85
12
26
6
53
1.62
20231--20286
21
2.7
21
72
5
51
8
17
1
71
1.21
20230--20286
14
4.1
14
75
16
57
8
17
1
71
1.19
20248--20351
18
5.6
18
73
10
84
6
18
3
71
1.24
20248--20355
6
17.7
6
70
5
74
6
18
3
71
1.23
21364--21444
29
2.9
26
75
13
81
9
16
3
70
1.29
21421--21466
12
4.0
11
80
8
56
15
8
0
76
1.02
21397--21466
14
5.5
13
74
20
58
10
10
1
78
1.03
23062--23126
20
3.3
19
73
16
51
38
16
21
23
1.93
26175--26222
14
3.4
14
80
11
53
43
8
29
18
1.79
34757--34821
15
4.4
15
90
1
96
12
15
12
60
1.60
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
37196--37367
46
3.8
46
82
13
221
20
21
29
28
1.98
37249--37314
20
3.1
20
65
23
53
18
19
31
30
1.96
37196--37362
45
3.7
45
83
11
209
20
22
29
28
1.98
37192--37359
89
1.9
90
93
1
293
20
22
30
27
1.98

Tables:   1

The End!