Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2875
Parameters: 2 7 7 80 10 50 1000
Length:  68807

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5519--5646
29
4.5
28
83
11
163
28
13
25
32
1.93
13617--13854
28
8.5
28
93
1
381
28
11
25
34
1.91
17516--17564
20
2.5
20
83
6
64
44
12
0
42
1.41
18814--18898
25
3.3
27
80
11
81
28
2
3
65
1.21
18801--18898
26
4.0
25
75
17
73
30
2
3
64
1.20
18868--18909
22
2.0
22
85
4
59
28
4
2
64
1.26
19383--19433
27
1.9
26
84
4
66
23
7
1
66
1.28
25505--25580
36
2.1
36
90
0
116
27
23
22
26
1.99
25541--25916
169
2.2
169
90
0
590
28
17
26
27
1.98
26045--26158
44
2.6
44
87
2
158
28
19
23
28
1.98
26217--26380
57
2.9
56
82
5
197
33
20
20
25
1.97
26874--26945
24
3.0
24
91
0
117
16
19
29
34
1.94
28320--28359
21
2.0
21
85
5
55
30
5
2
62
1.29
28295--28555
139
1.9
138
81
10
318
32
5
4
57
1.42
29854--29903
24
2.1
24
88
0
73
36
4
8
52
1.50
36232--36278
20
2.3
21
81
3
60
51
23
2
23
1.59
44181--44205
12
2.1
12
100
0
50
76
0
0
24
0.80
60566--60753
71
2.6
70
84
10
200
18
16
32
31
1.93

Tables:   1

The End!