Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2381
Parameters: 2 7 7 80 10 50 1000
Length:  58110

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7371--7417
20
2.3
20
85
0
67
21
12
36
29
1.91
10182--10217
9
3.9
9
85
7
54
2
8
0
88
0.59
10176--10235
19
3.0
19
85
9
84
5
11
1
81
0.91
11738--11784
20
2.3
20
85
0
67
21
12
36
29
1.91
19448--19544
30
3.2
30
75
2
106
27
26
16
28
1.97
25501--25558
22
2.7
21
89
7
89
31
5
34
29
1.79
26356--26422
31
2.1
32
81
13
77
31
29
11
26
1.92
26696--26754
30
2.0
30
83
6
75
28
15
25
30
1.96
31043--31107
20
3.3
19
73
16
51
38
16
21
23
1.93
32971--33005
18
1.9
18
88
11
54
22
20
0
57
1.41
32993--33097
6
17.2
6
66
9
52
7
17
3
71
1.25
33044--33097
6
9.2
6
75
4
56
3
14
5
75
1.12
37206--37255
18
2.8
18
87
0
64
76
6
14
4
1.13
37202--37255
6
9.2
6
77
2
56
75
5
14
3
1.12
37294--37328
18
1.9
18
88
11
54
57
0
20
22
1.41
48131--48191
10
6.1
10
74
12
54
32
13
24
29
1.93
48132--48192
20
3.0
20
83
9
79
32
13
26
27
1.93
57305--57377
30
2.5
30
88
4
105
39
19
19
21
1.92

Tables:   1

The End!