Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold669
Parameters: 2 7 7 80 10 50 1000
Length:  42679

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3976--4011
6
6.0
6
93
0
54
38
27
0
33
1.57
4019--4062
20
2.2
20
84
8
54
9
27
0
63
1.24
4000--4065
27
2.5
27
82
2
80
15
25
0
59
1.37
4889--4942
14
3.8
14
75
4
63
7
12
1
77
1.05
4871--4937
29
2.3
30
87
10
95
10
8
2
77
1.09
4984--5037
12
4.6
12
90
2
74
18
3
1
75
1.03
4978--5027
12
3.9
13
82
12
68
22
8
2
68
1.26
7120--7166
20
2.3
20
85
0
67
21
12
36
29
1.91
8834--8939
48
2.2
48
85
9
137
14
24
1
59
1.45
11535--11581
20
2.3
20
85
0
67
21
12
36
29
1.91
12248--12280
12
2.8
12
86
4
50
36
3
9
51
1.49
14071--14095
11
2.3
11
100
0
50
44
0
8
48
1.32
17079--17198
56
2.1
56
98
0
231
45
9
23
22
1.81
37882--38129
40
6.3
40
88
5
337
25
22
27
25
2.00
37882--38129
79
3.2
78
86
6
324
25
22
27
25
2.00
41531--41656
48
2.5
53
82
11
158
28
11
34
26
1.90

Tables:   1

The End!