Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2361
Parameters: 2 7 7 80 10 50 1000
Length:  53879

Tables:   1   

This is table  1  of  1  ( 26 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
210--252
19
2.3
19
95
0
77
25
16
23
34
1.95
346--423
32
2.4
33
76
18
83
35
2
1
60
1.19
9523--9794
44
6.1
45
72
5
194
29
18
25
26
1.98
9540--9798
133
1.9
133
87
0
374
28
18
25
27
1.98
11351--11386
3
12.0
3
93
0
63
36
0
0
63
0.94
12918--12964
22
2.1
22
88
4
67
48
0
0
51
1.00
12917--12965
12
4.2
12
82
12
66
48
0
0
51
1.00
12920--12955
9
3.9
9
89
7
54
47
0
0
52
1.00
13363--13408
17
2.6
17
86
6
56
58
0
2
39
1.10
13375--13411
17
2.1
18
95
5
67
59
0
2
37
1.12
16061--16088
14
2.0
14
100
0
56
21
28
21
28
1.99
17252--17464
34
6.2
34
80
3
205
51
17
7
23
1.71
17252--17464
68
3.1
66
80
10
232
51
17
7
23
1.71
25089--25147
3
19.7
3
100
0
118
33
0
32
33
1.58
27243--27292
21
2.4
21
80
6
57
36
14
42
8
1.74
29656--29690
17
1.9
19
88
11
56
45
2
5
45
1.41
30956--31018
18
3.6
18
71
16
51
65
1
1
31
1.12
36834--36874
20
2.0
20
95
0
73
34
7
7
51
1.58
37059--37083
10
2.5
10
100
0
50
0
8
0
92
0.40
37458--37538
41
2.0
40
80
2
90
58
14
9
17
1.63
39297--39350
23
2.3
23
81
15
58
42
7
7
42
1.61
41327--41361
16
2.2
16
100
0
70
54
11
5
28
1.59
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
44197--44235
17
2.2
18
86
4
53
43
5
28
23
1.75
44448--44501
25
2.2
25
84
12
69
42
7
5
44
1.55
52731--52772
19
2.3
19
91
4
68
26
16
23
33
1.96
52858--52923
30
2.3
27
76
16
69
34
1
1
62
1.14

Tables:   1

The End!