Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold668
Parameters: 2 7 7 80 10 50 1000
Length:  52720

Tables:   1   

This is table  1  of  1  ( 25 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5046--5092
12
3.8
12
85
5
58
14
4
4
76
1.09
7056--7095
14
2.9
14
88
0
53
50
7
32
10
1.64
9407--9459
23
2.4
22
76
20
56
9
18
1
69
1.25
11718--11742
6
4.2
6
100
0
50
68
16
0
16
1.22
18970--19139
93
1.8
93
87
0
250
22
20
27
28
1.99
19370--19407
19
2.0
20
85
15
53
36
0
23
39
1.55
22314--22410
30
3.2
30
68
8
81
27
15
29
26
1.96
23767--23814
20
2.4
20
71
0
51
20
27
18
33
1.96
27037--27145
26
4.2
26
89
2
157
33
8
22
34
1.84
31956--32025
12
5.5
13
76
17
58
12
7
4
75
1.15
36438--36495
29
2.0
30
83
10
75
63
3
22
10
1.40
38199--38245
20
2.3
20
85
0
67
29
36
12
21
1.91
38958--39001
22
2.0
22
95
0
79
34
4
36
25
1.76
41416--41449
14
2.4
14
100
0
68
82
5
0
11
0.83
42478--42583
48
2.2
47
85
9
135
59
1
24
14
1.45
44129--44182
20
2.7
20
82
0
63
24
20
18
37
1.94
44129--44202
30
2.5
30
86
8
98
21
20
18
39
1.93
44129--44193
20
3.2
20
71
16
53
23
21
16
38
1.93
45787--45843
11
4.7
12
74
18
55
70
3
8
17
1.28
46925--47015
17
5.2
17
69
16
62
72
2
17
7
1.18
46980--47035
14
4.2
13
72
14
51
71
1
17
8
1.21
48861--48914
20
2.7
20
82
0
63
24
20
18
37
1.94
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
48861--48934
30
2.5
30
86
8
98
21
20
18
39
1.93
48861--48925
20
3.2
20
71
16
53
23
21
16
38
1.93
50605--50652
20
2.3
21
82
3
62
29
35
14
20
1.93

Tables:   1

The End!