Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold726
Parameters: 2 7 7 80 10 50 1000
Length:  52563

Tables:   1   

This is table  1  of  1  ( 24 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
21944--21978
18
1.9
18
94
0
61
37
11
14
37
1.82
22096--22156
30
2.0
31
90
3
97
19
44
0
36
1.51
22106--22166
30
2.0
30
87
6
88
18
52
0
29
1.45
22260--22319
30
2.0
31
90
3
95
20
38
0
41
1.52
22405--22434
15
1.9
16
93
6
53
23
30
0
46
1.52
22423--22466
20
2.2
20
88
8
63
20
34
0
45
1.51
22578--22624
17
2.8
17
79
20
62
36
2
6
55
1.37
22718--22763
17
2.5
19
76
23
53
43
6
0
50
1.28
26014--26047
17
2.0
17
94
0
59
44
50
0
5
1.26
30644--30677
17
2.0
17
94
0
59
44
50
0
5
1.26
31056--31082
13
2.1
13
100
0
54
40
37
0
22
1.54
31898--31949
25
2.0
26
85
10
72
61
9
0
28
1.27
32785--32838
25
2.2
24
87
9
74
31
3
0
64
1.11
32816--32871
9
6.2
9
77
8
60
37
0
0
62
0.95
32809--32855
17
2.8
17
83
3
69
34
0
0
65
0.93
33339--33583
123
2.0
123
88
4
361
30
13
10
45
1.78
38821--38926
37
2.8
38
77
16
105
50
0
13
35
1.41
39213--39269
22
2.6
23
78
18
75
64
3
7
24
1.34
39980--40004
13
1.9
13
100
0
50
68
0
8
24
1.16
40460--40541
41
2.0
41
100
0
164
29
21
21
26
1.99
46975--47004
2
15.0
2
100
0
60
50
0
0
50
1.00
47719--47775
18
3.1
18
80
14
62
82
1
7
8
0.91
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
47730--47775
9
4.9
9
81
7
56
84
2
2
10
0.79
47733--47775
19
2.2
20
84
8
54
83
2
2
11
0.83

Tables:   1

The End!