Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2443
Parameters: 2 7 7 80 10 50 1000
Length:  52330

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
10720--10766
25
1.9
24
82
4
58
51
8
19
21
1.73
14752--14810
10
5.8
10
78
9
57
28
15
30
25
1.96
14754--14810
20
2.8
20
84
7
71
28
15
31
24
1.96
19586--19622
18
2.1
18
90
5
58
40
0
10
48
1.38
25206--25239
9
3.7
9
92
4
50
11
5
8
73
1.24
26796--26869
30
2.5
30
100
0
148
33
10
16
39
1.83
30649--30836
45
4.2
45
95
0
322
38
15
20
25
1.92
38134--38162
15
2.0
15
93
6
51
51
6
13
27
1.66
40497--40549
23
2.4
22
76
20
56
9
18
1
69
1.25
44539--44591
23
2.4
22
76
20
56
9
18
1
69
1.25
49606--49632
14
1.9
14
100
0
54
29
14
7
48
1.71

Tables:   1

The End!