Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold3414
Parameters: 2 7 7 80 10 50 1000
Length:  50784

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1419--1458
11
3.6
11
100
0
80
77
7
0
15
0.98
1500--1537
15
2.5
15
100
0
76
68
5
10
15
1.36
16871--16906
18
2.0
18
89
10
56
30
11
2
55
1.49
18162--18253
29
3.0
34
62
32
80
31
8
13
46
1.73
19568--19616
12
4.0
12
86
5
62
69
12
6
12
1.35
19568--19619
13
4.2
13
87
7
72
67
13
5
13
1.40
19658--19708
13
3.8
13
78
14
50
68
0
11
19
1.20
19655--19709
14
3.9
14
86
6
76
65
0
12
21
1.26
19660--19709
15
3.4
15
88
5
75
72
0
10
18
1.12
24268--24906
326
2.0
326
83
1
825
41
17
19
21
1.91
24974--25042
35
2.0
35
97
0
129
28
13
37
20
1.90
31154--31188
18
1.9
18
94
0
61
22
22
0
54
1.45
32164--32220
30
1.9
30
92
0
96
15
14
3
66
1.38
39704--39766
21
3.0
21
85
2
81
28
3
34
33
1.73
43597--43655
12
5.0
12
87
4
84
74
5
3
16
1.13
43597--43654
11
5.0
11
79
10
62
74
5
3
17
1.15
44579--44605
11
2.5
11
100
0
54
74
7
18
0
1.05

Tables:   1

The End!