Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1910
Parameters: 2 7 7 80 10 50 1000
Length:  98447

Tables:   1   

This is table  1  of  1  ( 28 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3478--3518
19
2.2
19
86
8
57
70
0
0
29
0.87
15142--15166
11
2.3
11
100
0
50
64
8
8
20
1.46
18599--18647
24
2.0
24
84
4
62
34
6
2
57
1.35
26025--26070
13
3.1
15
79
20
53
43
0
0
56
0.99
31384--31418
16
2.3
15
90
5
52
82
0
17
0
0.66
44030--44084
6
9.2
6
97
0
74
16
58
0
25
1.38
44019--44079
18
3.4
18
81
4
61
14
55
0
29
1.40
44030--44094
12
5.4
12
90
0
76
15
56
1
26
1.48
44033--44094
18
3.4
18
86
0
79
16
56
1
25
1.49
46310--46347
3
12.7
3
88
0
58
73
0
26
0
0.83
46304--46347
9
4.9
9
91
0
61
75
0
22
2
0.92
50221--50245
10
2.5
10
100
0
50
24
28
16
32
1.96
54645--54669
10
2.5
10
100
0
50
24
28
16
32
1.96
57500--57751
69
3.7
68
73
6
197
25
21
19
32
1.97
64712--64900
105
1.8
105
94
2
335
27
8
28
35
1.87
73296--73381
39
2.2
39
97
0
163
19
36
23
20
1.95
73101--73533
234
1.9
233
98
0
830
23
25
23
27
2.00
80097--80126
15
2.0
15
100
0
60
26
33
13
26
1.93
81842--81903
12
5.9
10
77
18
56
64
4
3
27
1.29
81856--81887
3
10.7
3
93
0
55
65
0
3
31
1.08
83223--83384
87
1.9
87
84
2
218
25
24
20
29
1.99
83310--83608
131
2.3
131
79
9
315
25
22
22
30
1.99
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
83312--83607
87
3.4
85
78
6
272
25
22
21
30
1.99
83183--83654
218
2.2
218
95
0
838
26
22
21
30
1.98
83235--83608
44
8.6
44
74
6
287
25
22
21
30
1.99
84856--84887
1
32.0
1
100
0
64
0
0
0
100
0.00
95909--95955
21
2.3
20
78
10
51
57
14
4
23
1.55
96216--96247
3
10.7
3
93
0
55
65
0
3
31
1.08

Tables:   1

The End!