Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2602
Parameters: 2 7 7 80 10 50 1000
Length:  62617

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1794--2045
43
5.9
41
78
13
208
27
30
20
21
1.98
2694--2737
19
2.4
18
80
3
52
65
4
0
29
1.12
8124--8173
24
2.0
25
96
3
93
18
12
6
64
1.47
12310--12336
14
1.9
14
100
0
54
37
22
25
14
1.93
13290--13396
53
2.0
53
94
0
187
35
6
21
36
1.80
20095--20149
19
2.9
19
81
2
67
20
18
9
52
1.71
25242--25582
50
6.8
50
82
1
362
28
20
28
22
1.99
32683--32715
9
3.8
9
92
4
50
18
9
27
45
1.79
37151--37188
14
2.7
15
88
8
53
23
23
21
31
1.98
43780--43957
27
6.6
27
83
3
205
26
15
28
29
1.96
43781--43936
82
1.9
81
88
3
233
26
15
28
29
1.96
43777--43957
82
2.2
81
83
2
229
27
15
27
29
1.96
51959--52135
27
6.6
27
82
5
196
26
15
28
29
1.96
51959--52135
55
3.3
54
82
4
205
26
15
28
29
1.96
60110--60288
27
6.5
27
80
9
130
26
14
30
29
1.95
60194--60288
28
3.5
27
87
5
122
26
13
29
30
1.94
62490--62563
18
4.2
17
81
11
78
81
12
1
5
0.93
62508--62563
12
4.8
11
85
10
76
83
10
0
5
0.78
62529--62601
20
3.5
20
76
22
71
76
8
0
15
1.00

Tables:   1

The End!