Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold3793
Parameters: 2 7 7 80 10 50 1000
Length:  41554

Tables:   1   

This is table  1  of  1  ( 25 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
387--463
36
2.1
36
85
0
100
27
31
16
24
1.97
578--1042
46
10.1
47
86
10
669
29
31
7
31
1.86
580--1042
182
2.5
184
88
8
671
29
31
7
31
1.86
4468--4653
39
4.8
39
83
6
200
25
27
22
24
1.99
4476--4653
77
2.3
77
82
7
216
25
28
21
24
1.99
4546--4762
39
5.6
38
80
11
128
24
28
21
25
1.99
4630--4714
34
2.3
38
80
17
108
23
29
21
25
1.99
5071--5150
30
2.7
29
83
9
99
27
32
15
25
1.95
5155--5183
14
2.0
15
93
6
51
41
37
13
6
1.72
7044--7121
37
2.1
36
88
2
111
25
32
17
24
1.97
7240--7623
47
8.1
47
92
3
630
28
30
8
32
1.87
7240--7623
142
2.7
141
93
3
630
28
30
8
32
1.87
7240--7623
189
2.0
188
94
1
671
28
30
8
32
1.87
11441--11665
27
8.3
27
82
3
213
38
20
9
30
1.85
11642--11969
27
12.2
27
86
0
406
30
22
7
40
1.80
11604--11969
81
4.5
79
79
7
369
31
22
7
39
1.81
12206--12257
27
2.0
26
84
3
68
17
26
21
34
1.95
12530--12612
6
13.8
6
90
0
130
18
15
13
53
1.74
17047--17166
46
2.6
44
84
7
134
29
19
30
21
1.97
17228--17360
49
2.7
49
78
11
155
29
21
26
22
1.99
17185--17360
98
1.8
96
83
6
232
27
21
27
23
1.99
17092--17354
141
1.9
138
82
6
332
29
20
26
23
1.98
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
27352--27427
22
3.3
22
66
16
64
30
10
32
26
1.90
27067--27595
47
11.3
47
92
1
855
33
8
30
28
1.87
30132--30184
25
2.1
25
92
0
88
24
24
18
32
1.97

Tables:   1

The End!