Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold3562
Parameters: 2 7 7 80 10 50 1000
Length:  59609

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8183--8228
13
3.6
13
91
2
76
73
6
4
15
1.19
8273--8344
32
2.3
31
86
11
103
75
2
12
9
1.16
8273--8344
31
2.3
31
88
4
101
75
2
12
9
1.16
8282--8341
17
3.7
16
73
8
50
73
3
11
11
1.21
9228--9266
15
2.4
15
87
12
51
66
2
20
10
1.33
12552--12599
13
3.6
14
94
5
82
77
6
4
12
1.11
12640--12664
13
1.9
13
100
0
50
84
0
16
0
0.63
12637--12714
31
2.4
33
81
10
99
73
1
12
12
1.17
13605--13643
15
2.4
15
87
12
51
66
2
20
10
1.33
17179--17222
13
3.5
13
87
6
63
75
6
4
13
1.17
17260--17314
14
3.9
14
92
7
94
65
0
12
21
1.26
18272--18317
19
2.3
21
85
7
60
58
2
32
6
1.36
27528--27608
40
2.0
41
95
4
146
39
9
18
32
1.84
34888--34931
22
2.0
22
95
0
79
34
4
36
25
1.76
39879--39922
22
2.0
22
95
0
79
34
4
36
25
1.76
45358--45399
18
2.2
19
83
8
50
14
7
7
71
1.29
51067--51111
11
4.1
11
77
11
56
15
6
2
75
1.11
51068--51111
12
3.9
12
80
17
58
13
6
2
77
1.07
51070--51109
21
1.9
21
89
0
62
10
7
2
80
1.00

Tables:   1

The End!