Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold3265
Parameters: 2 7 7 80 10 50 1000
Length:  41302

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4850--4975
40
3.2
40
83
5
159
23
20
26
28
1.99
12867--12992
40
3.2
39
86
5
173
23
22
27
26
1.99
21209--21845
40
15.7
40
91
2
977
24
28
21
25
1.99
21209--21845
82
7.8
80
89
3
977
24
28
21
25
1.99
21209--21845
122
5.2
122
93
1
1030
24
28
21
25
1.99
28985--29471
40
12.0
40
90
3
724
24
29
21
25
1.99
28985--29471
82
6.0
80
89
4
724
24
29
21
25
1.99
28985--29465
122
3.9
122
95
0
820
24
28
21
25
1.99
35362--35527
46
3.6
46
74
13
162
21
18
28
32
1.96
36956--37122
46
3.6
46
76
10
187
20
16
28
33
1.95
38542--38706
46
3.6
46
75
11
160
21
17
29
32
1.96
40119--40288
46
3.7
45
77
12
177
21
19
28
30
1.98

Tables:   1

The End!