Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1770
Parameters: 2 7 7 80 10 50 1000
Length:  100002

Tables:   1   

This is table  1  of  1  ( 36 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
24--15348
7
2219.0
7
76
19
11665
44
39
1
14
1.55
1619--1671
5
9.4
5
81
18
52
45
37
0
16
1.48
9239--9268
10
3.0
10
95
0
51
46
43
0
10
1.37
12451--12496
10
4.7
10
78
13
51
47
39
0
13
1.42
12930--12962
9
3.5
10
88
12
52
36
42
12
9
1.74
14803--14856
15
3.6
14
87
12
56
44
40
0
14
1.46
15880--15904
12
2.1
12
100
0
50
68
8
24
0
1.16
16918--17031
22
5.5
21
83
8
137
41
23
25
9
1.85
16918--17052
21
6.5
22
80
10
119
40
25
24
9
1.86
17441--17498
30
1.9
30
96
0
107
32
10
20
36
1.87
24860--24900
22
1.9
22
90
5
66
41
19
4
34
1.73
26647--26702
22
2.5
22
88
2
76
37
30
25
7
1.82
27096--27153
30
1.9
30
96
0
107
32
10
20
36
1.87
36092--36151
29
2.0
30
96
3
113
41
3
6
48
1.46
37978--38028
3
17.0
3
95
0
93
0
33
1
64
1.05
39104--39234
35
3.7
35
76
6
140
35
14
28
22
1.93
40872--40908
19
1.9
19
88
0
56
59
32
0
8
1.27
45823--45867
22
2.0
22
100
0
90
8
8
26
55
1.60
50225--50259
18
1.9
18
88
0
52
37
0
17
45
1.48
52509--53009
251
2.0
251
96
0
914
36
18
13
31
1.90
53562--53597
18
1.9
18
88
5
54
69
2
0
27
1.02
54083--54124
3
14.0
3
100
0
84
66
0
0
33
0.92
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
59850--59884
18
1.9
18
100
0
70
11
28
0
60
1.32
61869--62127
117
2.2
119
92
3
425
44
1
5
49
1.33
62075--62131
15
3.5
16
81
18
57
43
0
1
54
1.10
62763--62801
20
2.0
20
100
0
78
41
0
5
53
1.23
62919--63009
45
2.0
44
87
2
128
34
28
5
31
1.80
62988--63025
16
2.4
16
90
0
58
34
34
0
31
1.58
68465--68508
12
3.6
12
77
17
54
40
9
9
40
1.68
68464--68522
25
2.4
25
100
0
118
37
10
11
40
1.76
68477--68521
13
3.5
13
77
17
58
37
11
11
40
1.76
69591--69858
104
2.6
105
93
1
450
18
20
30
29
1.97
77420--77517
31
3.2
31
79
0
106
20
23
26
29
1.99
87764--87793
12
2.5
12
94
0
51
66
0
23
10
1.21
93359--93456
31
3.2
31
79
0
106
29
26
23
20
1.99
97888--97926
20
2.0
20
85
14
55
35
2
0
61
1.10

Tables:   1

The End!