Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1680
Parameters: 2 7 7 80 10 50 1000
Length:  74757

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
13612--13829
39
5.6
39
81
12
204
25
27
22
25
2.00
13612--13779
40
4.4
37
82
13
182
25
27
21
25
1.99
21244--21458
37
5.7
40
80
12
161
25
27
21
25
1.99
24055--24205
39
3.9
38
89
6
178
27
19
26
25
1.99
24011--24233
40
5.7
40
85
7
244
25
21
26
25
2.00
24131--24252
40
3.1
40
86
6
117
24
22
29
23
1.99
31908--32171
79
3.3
79
88
4
354
26
21
25
26
2.00
31908--32171
40
6.6
39
79
8
275
26
21
25
26
2.00
31964--32196
79
2.9
79
86
5
267
27
19
26
26
1.99
33918--33961
10
4.4
9
91
8
52
18
0
9
72
1.10
33918--33953
10
3.6
10
92
7
56
19
0
11
69
1.18
40308--40373
28
2.4
28
87
5
91
51
12
10
25
1.71
55478--55518
17
2.4
17
95
0
73
14
4
7
73
1.22
55558--55584
14
1.9
14
100
0
54
14
0
7
77
0.97
61848--61903
27
2.1
27
100
0
112
48
16
10
25
1.78
62277--62326
22
2.4
20
75
18
57
16
4
14
66
1.40
64400--64463
31
2.1
31
100
0
128
23
28
9
39
1.86
73986--74137
42
3.5
43
76
7
123
23
18
25
32
1.97
74163--74371
103
2.0
103
97
0
391
37
10
21
31
1.86
74643--74727
43
2.0
43
97
0
161
36
21
14
28
1.92

Tables:   1

The End!