Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2966
Parameters: 2 7 7 80 10 50 1000
Length:  71954

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3508--3605
39
2.5
39
83
9
110
27
30
15
26
1.96
14174--14377
35
5.6
37
79
15
178
27
18
26
26
1.98
14174--14377
75
2.8
72
79
13
188
27
18
26
26
1.98
20811--20942
40
3.3
40
84
3
142
28
27
18
25
1.98
20839--20941
39
2.6
41
89
4
149
29
28
16
26
1.97
20811--20995
79
2.3
80
78
7
189
27
27
20
25
1.99
26527--26576
18
2.8
17
79
8
55
50
2
4
44
1.32
27186--27215
14
2.1
14
93
0
51
16
43
0
40
1.48
40563--40700
56
2.6
55
81
7
160
27
21
26
24
1.99
40613--40734
51
2.4
50
79
2
127
28
23
27
20
1.99
41005--41043
20
2.0
20
90
10
62
56
5
23
15
1.59
42397--42509
50
2.3
49
78
4
127
30
23
23
23
1.99
42397--42509
25
4.5
25
68
16
72
30
23
23
23
1.99
48428--48484
28
2.0
28
96
0
105
47
8
17
26
1.77
48929--48953
12
2.1
12
100
0
50
16
20
32
32
1.94
59861--59905
15
2.9
15
83
9
56
35
0
4
60
1.17
70468--71250
389
2.0
389
92
0
1305
31
16
20
30
1.95

Tables:   1

The End!