Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold3649
Parameters: 2 7 7 80 10 50 1000
Length:  62325

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8814--8838
13
1.9
13
100
0
50
80
0
16
4
0.87
8929--8963
18
1.9
18
88
0
52
74
0
22
2
0.95
9086--9147
32
1.9
32
83
3
79
61
1
29
8
1.34
21553--21599
20
2.3
20
81
0
58
29
34
12
23
1.92
25665--25698
16
2.1
16
88
0
50
55
20
5
17
1.62
30079--30191
46
2.4
46
88
4
165
45
8
11
34
1.72
34812--34854
18
2.4
18
92
0
68
72
4
16
6
1.24
43804--43848
11
4.0
11
88
5
72
75
8
0
15
1.03
43807--43849
12
3.7
12
93
6
79
81
6
0
11
0.87
43892--43944
16
3.4
15
87
7
79
64
3
11
20
1.42
43892--43944
15
3.3
16
89
5
81
64
3
11
20
1.42
48291--48384
32
2.7
34
83
14
120
26
30
21
21
1.98
48352--48585
40
5.9
40
86
3
294
27
28
19
24
1.99
56251--56503
40
6.6
39
85
7
272
26
28
19
24
1.98
56311--56503
79
2.4
78
90
1
287
27
29
18
24
1.98
56311--56540
79
2.9
78
86
5
243
27
29
18
24
1.98
60922--60954
14
2.4
14
90
5
50
36
9
0
54
1.32

Tables:   1

The End!