Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold638
Parameters: 2 7 7 80 10 50 1000
Length:  62167

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8354--8429
10
7.6
10
77
11
75
28
15
27
27
1.96
8346--8430
20
4.3
20
89
1
118
29
17
27
25
1.98
8346--8437
40
2.3
40
88
1
132
30
16
28
25
1.96
8346--8437
10
9.3
10
73
10
64
30
16
28
25
1.96
8346--8442
20
4.9
19
85
6
113
30
15
27
25
1.96
11902--11943
17
2.4
18
88
4
59
14
28
2
54
1.52
13835--13879
22
2.0
23
82
4
56
40
28
4
26
1.75
17817--17863
13
3.6
13
80
8
51
70
0
25
4
1.05
17966--18024
18
3.5
17
80
13
59
64
3
27
5
1.30
28985--29028
18
2.4
18
88
11
63
72
2
20
4
1.13
30782--30853
33
2.1
34
87
2
101
41
6
11
40
1.67
37392--37569
40
4.5
39
84
4
180
26
20
27
24
1.99
37398--37569
80
2.2
79
84
3
220
26
21
27
24
1.99
37345--37571
40
5.7
39
79
8
172
26
20
27
25
1.99
37425--37602
79
2.2
80
81
3
191
26
21
28
23
1.99
39151--39310
80
2.0
80
100
0
320
16
21
20
42
1.89
48108--48144
15
2.4
16
95
4
67
21
8
0
70
1.13
49374--49417
22
1.9
24
86
9
65
65
15
0
18
1.27
51091--51138
26
1.9
24
83
8
60
8
33
2
56
1.41
53830--53874
19
2.3
19
80
3
54
75
0
17
6
1.01
59297--59378
42
2.0
42
97
0
155
39
8
18
34
1.81

Tables:   1

The End!