Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2386
Parameters: 2 7 7 80 10 50 1000
Length:  42532

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1456--1568
25
4.3
27
80
14
146
40
23
18
17
1.91
4966--5170
27
7.6
27
83
3
223
26
15
29
29
1.96
4967--5170
54
3.8
54
84
3
257
25
15
29
29
1.96
13123--13327
27
7.6
27
83
3
223
26
15
29
29
1.96
13124--13327
54
3.8
54
84
3
257
25
15
29
29
1.96
16070--16168
30
3.4
29
87
2
137
24
28
24
23
2.00
16804--16838
13
2.7
13
87
12
54
34
17
11
37
1.85
17838--18194
41
8.6
40
73
8
293
22
16
24
36
1.94
17837--18198
84
4.4
83
88
4
509
22
16
24
36
1.94
22781--22813
13
2.5
13
100
0
66
36
18
6
39
1.75
23825--24182
42
8.6
41
77
10
318
22
16
25
35
1.94
23825--24182
84
4.3
84
88
1
508
22
16
25
35
1.94
31723--31757
17
2.1
17
89
10
54
20
8
0
71
1.11

Tables:   1

The End!