Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold461
Parameters: 2 7 7 80 10 50 1000
Length:  88335

Tables:   1   

This is table  1  of  1  ( 25 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
877--930
20
2.7
20
82
0
63
24
20
18
37
1.94
877--950
30
2.5
30
86
8
98
21
20
18
39
1.93
877--941
20
3.2
20
71
16
53
23
21
16
38
1.93
13612--13662
22
2.3
21
86
6
66
35
33
3
27
1.75
13617--13679
21
3.0
21
85
2
72
33
30
4
31
1.78
20692--20728
18
2.1
18
90
5
58
40
0
10
48
1.38
36087--36188
30
3.4
29
71
7
89
31
15
24
28
1.96
40132--40171
14
2.7
15
96
3
73
67
2
12
17
1.33
41097--41143
23
2.1
23
84
7
62
51
12
4
31
1.59
46681--46783
30
3.4
29
69
6
89
31
14
25
29
1.95
53188--53244
16
3.6
16
88
7
71
21
12
5
61
1.50
53188--53244
15
3.6
16
90
7
89
21
12
5
61
1.50
53444--53758
157
2.0
157
96
0
585
48
13
16
21
1.79
54465--54511
23
2.1
23
84
7
62
51
12
4
31
1.59
55968--56014
20
2.3
20
85
0
67
29
36
12
21
1.91
57396--57440
18
2.5
17
82
13
54
73
4
15
6
1.21
57394--57445
18
2.8
18
75
16
52
67
3
19
9
1.35
59657--59703
20
2.3
20
85
0
67
21
12
36
29
1.91
61372--61477
48
2.2
48
85
9
137
14
24
1
59
1.45
61453--61537
18
4.6
17
71
16
62
17
28
2
51
1.58
64096--64142
20
2.3
20
85
0
67
21
12
36
29
1.91
73177--73273
30
3.2
30
75
2
106
28
26
15
28
1.96
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
74906--74968
21
3.0
21
88
6
83
31
33
6
28
1.82
75598--75631
16
2.2
16
89
5
52
64
5
2
26
1.30
76277--76370
46
2.0
46
97
0
179
34
22
18
25
1.96

Tables:   1

The End!