Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2950
Parameters: 2 7 7 80 10 50 1000
Length:  85266

Tables:   1   

This is table  1  of  1  ( 23 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4826--4880
15
3.8
15
85
2
69
1
21
1
74
1.01
6976--7011
14
2.6
14
91
8
56
19
8
2
69
1.27
9205--9251
20
2.3
20
85
0
67
21
12
36
29
1.91
10273--10373
52
1.9
52
95
0
184
32
21
18
26
1.97
18857--18910
21
2.5
21
84
3
63
31
5
29
33
1.80
18859--18924
21
3.0
22
82
4
62
31
4
28
34
1.78
26147--26200
24
2.2
25
78
15
60
11
22
3
62
1.43
28437--28465
14
2.1
14
100
0
58
13
6
6
72
1.26
28442--28482
18
2.3
18
91
0
64
7
4
4
82
0.93
31839--31904
21
3.0
22
86
4
80
30
4
30
34
1.78
34683--34783
52
1.9
52
91
0
166
32
19
18
28
1.96
38804--38847
21
2.1
21
87
8
63
31
6
34
27
1.83
38816--38873
23
2.6
23
86
8
75
29
3
31
36
1.74
46847--46890
22
2.0
22
95
0
79
25
36
4
34
1.76
47201--47228
11
2.5
11
100
0
56
78
0
7
14
0.95
51755--51817
21
3.0
21
88
2
81
33
31
4
30
1.78
52224--52248
12
2.1
12
100
0
50
24
28
0
48
1.52
53215--53276
30
2.1
28
82
14
72
4
16
4
74
1.17
53259--53326
11
5.5
12
77
16
59
14
7
4
73
1.21
58190--58230
17
2.4
18
80
8
50
14
24
4
56
1.58
69141--69187
23
2.1
23
84
7
62
51
12
4
31
1.59
81374--81405
4
8.0
4
100
0
64
75
0
0
25
0.81
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
85126--85159
4
8.0
4
93
6
50
76
0
0
23
0.79

Tables:   1

The End!