Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1265
Parameters: 2 7 7 80 10 50 1000
Length:  76017

Tables:   1   

This is table  1  of  1  ( 40 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
794--819
13
2.0
13
100
0
52
15
0
7
76
0.99
899--927
10
2.7
11
94
5
51
6
3
6
82
0.93
8570--8630
23
2.9
22
76
11
56
62
1
24
11
1.38
16305--16361
21
2.6
22
88
5
80
33
33
1
31
1.68
16310--16372
21
3.0
20
81
11
72
31
33
4
30
1.78
17793--17836
22
2.0
22
90
0
70
27
36
2
34
1.70
20671--20712
12
3.7
12
87
6
52
78
4
2
14
1.01
20659--20716
24
2.5
22
75
5
62
84
3
1
10
0.81
20656--20732
39
1.9
41
86
5
113
79
2
3
14
0.99
20670--20713
11
3.8
12
85
11
56
79
4
2
13
0.98
25324--25386
21
3.0
21
80
2
72
33
3
30
33
1.74
28022--28066
19
2.3
20
84
7
65
77
2
13
6
1.05
28085--28114
15
2.1
15
93
6
53
73
0
20
6
1.05
30147--30219
30
2.5
30
84
10
105
31
12
24
31
1.92
30166--30231
30
2.2
30
81
10
73
27
13
31
27
1.94
30773--30844
20
3.7
20
83
1
92
25
27
15
31
1.95
32554--32613
12
5.1
12
80
11
70
73
5
5
16
1.19
32658--32726
30
2.3
29
90
2
102
76
1
10
11
1.08
33574--33612
15
2.4
15
87
12
51
66
2
20
10
1.33
35093--35147
20
2.8
20
88
0
83
25
29
16
29
1.97
36927--36985
12
5.0
12
80
12
68
72
5
5
16
1.20
37026--37050
13
1.9
13
100
0
50
84
0
16
0
0.63
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
37032--37094
26
2.3
27
86
10
85
76
1
9
12
1.09
37031--37097
27
2.4
27
83
14
84
76
1
10
11
1.10
37944--37982
15
2.4
15
87
12
51
66
2
20
10
1.33
39462--39516
20
2.8
20
88
0
83
25
29
16
29
1.97
39864--39890
12
2.2
12
100
0
54
33
7
14
44
1.73
42786--47739
998
5.0
990
98
1
9423
40
16
16
26
1.90
48950--49002
23
2.4
22
76
20
56
9
18
1
69
1.25
51349--51376
4
7.0
4
100
0
56
75
0
0
25
0.81
53459--53521
21
3.0
21
83
2
81
33
34
3
28
1.73
58523--58619
30
3.2
29
73
5
95
28
26
16
27
1.97
59549--59723
93
1.9
93
98
0
341
28
13
16
42
1.85
60248--60299
23
2.3
22
75
21
54
9
23
1
65
1.32
61853--61887
10
3.5
10
84
0
52
45
14
17
22
1.84
65052--65282
45
5.2
45
94
1
394
25
20
15
38
1.92
65052--65282
89
2.6
90
93
1
394
25
20
15
38
1.92
68734--68780
20
2.3
20
85
0
67
21
12
36
29
1.91
71550--71589
18
2.3
18
86
4
55
5
15
2
77
1.04
75307--75353
20
2.3
20
81
0
58
23
12
34
29
1.92

Tables:   1

The End!