Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1404
Parameters: 2 7 7 80 10 50 1000
Length:  38995

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4122--4197
29
2.8
28
80
9
79
19
3
31
44
1.69
4149--4215
24
2.9
23
78
12
82
17
2
34
44
1.64
5276--5327
19
2.9
18
85
5
61
9
7
3
78
1.06
5275--5350
16
4.7
15
77
18
64
10
9
2
77
1.08
5454--5494
19
2.2
19
100
0
82
29
26
4
39
1.77
11697--11748
15
3.2
15
73
19
50
44
0
1
53
1.11
11781--11817
16
2.3
16
86
13
58
40
0
0
59
0.97
19864--19908
17
2.6
17
86
6
56
2
31
2
64
1.18
19921--19992
17
4.2
17
73
16
60
9
8
2
79
1.04
19921--19977
19
3.2
18
82
7
62
10
7
3
78
1.05
26331--26382
15
3.2
15
73
19
50
44
0
1
53
1.11
26415--26451
16
2.3
16
86
13
58
40
0
0
59
0.97
37463--37530
28
2.7
23
76
20
73
17
4
32
45
1.68
37436--37519
28
3.0
28
87
1
114
20
4
29
45
1.71
38541--38588
18
2.7
18
84
12
64
2
31
2
64
1.16
38593--38671
17
4.7
16
79
13
79
10
8
2
78
1.05

Tables:   1

The End!