Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1501
Parameters: 2 7 7 80 10 50 1000
Length:  68474

Tables:   1   

This is table  1  of  1  ( 36 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6468--6495
1
28.0
1
100
0
56
100
0
0
0
0.00
7733--7987
86
2.9
88
84
4
313
30
23
22
23
1.99
7742--8041
86
3.5
84
81
7
300
30
23
22
23
1.99
7982--8287
44
7.1
43
71
13
186
30
20
23
25
1.98
9587--9649
18
3.4
17
83
14
63
30
4
1
63
1.24
9610--9680
3
23.3
3
75
13
65
29
7
2
60
1.37
21153--21361
92
2.3
91
85
5
269
45
3
3
46
1.37
21289--21336
26
1.9
25
84
16
64
45
0
2
52
1.12
21415--21622
66
3.3
65
67
23
185
41
3
6
48
1.45
21377--21669
120
2.4
120
93
2
491
42
3
4
49
1.39
21631--21672
15
2.7
16
82
14
52
45
0
2
52
1.13
21622--21663
15
2.9
15
82
10
52
47
0
0
52
1.00
21622--21850
76
3.0
76
63
15
184
46
3
3
47
1.35
21606--21887
151
1.9
151
96
0
528
47
3
3
46
1.34
21769--21803
18
2.0
17
88
5
52
45
0
0
54
0.99
21793--21842
26
2.0
25
84
11
66
50
0
4
46
1.20
22039--22074
16
2.2
16
95
0
63
38
33
0
27
1.57
22188--22222
9
3.9
9
84
0
52
11
37
14
37
1.82
32300--32344
19
2.4
19
77
7
56
64
4
6
24
1.37
35656--35724
29
2.4
27
79
15
75
21
17
13
47
1.81
55831--55893
21
3.1
21
90
4
103
39
6
12
41
1.69
55830--55902
19
3.7
19
83
7
101
38
8
13
39
1.75
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
56221--56250
13
2.4
13
94
5
53
13
0
0
86
0.57
56658--56706
24
2.0
26
88
8
75
30
8
4
57
1.47
57377--57573
98
2.0
98
95
0
358
27
10
25
37
1.88
61662--61711
14
3.8
13
77
17
50
78
0
20
2
0.86
61665--61703
20
2.0
21
90
10
64
79
0
20
0
0.73
62916--63928
132
7.7
132
94
0
1729
30
20
24
24
1.98
62924--63890
44
22.0
43
62
17
227
30
20
24
24
1.99
63921--64579
44
15.2
44
68
14
259
29
19
22
27
1.98
63921--64584
217
3.1
217
91
1
1053
29
19
23
27
1.98
64787--64916
19
6.7
19
92
3
224
37
10
14
37
1.80
64787--64916
59
2.2
57
92
5
224
37
10
14
37
1.80
65241--65266
13
2.0
13
100
0
52
15
0
0
84
0.62
65666--65715
25
2.0
26
92
4
84
32
8
4
56
1.47
66374--66570
98
2.0
98
93
0
340
28
9
23
38
1.86

Tables:   1

The End!