Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold3125
Parameters: 2 7 7 80 10 50 1000
Length:  63237

Tables:   1   

This is table  1  of  1  ( 24 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
713--803
1
91.0
1
80
0
83
87
1
3
7
0.68
710--803
40
2.4
39
83
11
113
87
1
3
8
0.70
713--799
24
3.8
23
82
13
92
87
1
3
8
0.70
780--806
14
1.9
14
100
0
54
77
0
0
22
0.76
9829--9914
29
3.1
26
74
21
77
37
0
3
59
1.15
9846--9883
20
1.9
20
84
10
51
42
0
0
57
0.98
10765--10795
14
2.3
13
94
5
53
74
0
0
25
0.82
11435--11471
12
3.5
11
79
20
51
37
0
0
62
0.96
17303--17327
11
2.3
11
100
0
50
92
0
8
0
0.40
26478--26879
201
2.0
201
99
0
795
29
16
12
41
1.85
38810--38866
29
1.9
30
85
7
80
56
5
0
38
1.22
39858--39942
31
2.8
31
76
5
93
52
4
3
38
1.39
40813--40864
18
2.9
17
83
11
59
55
1
0
42
1.10
41855--41909
3
18.0
3
78
17
60
32
1
3
61
1.24
41855--41891
14
2.6
14
91
0
56
29
2
5
62
1.31
41827--41908
22
3.8
22
78
12
80
31
2
4
60
1.30
41852--41921
8
7.8
8
75
24
52
32
4
2
60
1.31
41855--41909
11
4.5
12
84
15
60
32
1
3
61
1.24
42047--42097
25
2.0
26
85
11
70
31
7
3
56
1.46
48299--48339
21
2.0
21
90
0
64
29
21
29
19
1.98
52732--52756
3
8.3
3
100
0
50
36
0
0
64
0.94
62641--62710
23
3.1
22
72
15
63
38
2
4
54
1.35
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
62670--62710
16
2.5
16
92
4
64
39
2
4
53
1.35
63051--63075
12
2.1
12
100
0
50
92
0
8
0
0.40

Tables:   1

The End!