Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2673
Parameters: 2 7 7 80 10 50 1000
Length:  59544

Tables:   1   

This is table  1  of  1  ( 24 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6456--6522
31
2.2
29
81
5
71
55
7
2
34
1.43
7955--7995
21
2.0
21
85
9
57
39
7
7
46
1.60
10758--10817
31
1.9
32
89
3
95
18
11
50
20
1.77
11867--12041
9
18.9
9
68
14
72
61
2
5
30
1.30
12122--12167
10
4.2
11
79
17
51
73
0
4
21
1.00
12218--12246
7
4.1
7
100
0
58
86
13
0
0
0.58
12618--12703
38
2.3
37
82
6
100
33
4
2
59
1.31
12651--12703
18
2.8
19
71
8
54
33
1
3
60
1.26
13777--13815
6
6.5
6
96
0
60
0
61
0
38
0.96
19459--19499
21
2.0
21
90
0
64
29
21
29
19
1.98
22916--22963
24
2.0
24
87
0
69
75
2
10
12
1.14
29165--29299
67
2.0
67
98
0
261
21
19
31
27
1.97
30763--31041
125
2.2
124
91
1
450
31
23
17
28
1.97
35453--35510
30
1.9
30
89
0
89
41
3
24
31
1.71
35722--35753
13
2.5
13
94
0
55
31
0
12
56
1.37
35848--36089
50
4.7
50
86
4
297
26
24
29
19
1.99
35848--36097
100
2.4
103
88
6
364
26
24
29
20
1.99
43044--43101
30
1.9
30
89
0
89
41
3
24
31
1.71
43313--43344
13
2.5
13
94
0
55
31
0
12
56
1.37
43439--43680
50
4.7
50
86
4
297
26
24
29
19
1.99
43439--43688
100
2.4
103
88
6
364
26
24
29
20
1.99
46136--46211
23
3.3
23
96
0
143
31
26
21
21
1.98
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
46298--46326
8
3.6
8
100
0
58
34
27
13
24
1.93
46431--46469
18
2.2
17
86
13
53
46
20
0
33
1.51

Tables:   1

The End!