Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1929
Parameters: 2 7 7 80 10 50 1000
Length:  58980

Tables:   1   

This is table  1  of  1  ( 28 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9093--9270
27
6.6
27
85
3
205
29
29
14
26
1.95
9093--9270
54
3.3
54
85
3
232
29
29
14
26
1.95
9114--9269
81
1.9
82
88
3
235
29
29
14
26
1.95
11560--11657
28
3.5
28
87
0
133
31
24
12
31
1.92
12863--13301
235
1.9
235
93
0
752
29
12
22
34
1.92
19606--19670
33
2.0
33
87
0
94
40
6
13
40
1.70
22750--23056
27
11.4
27
81
4
284
42
19
17
19
1.89
22774--23038
81
3.3
80
82
3
325
43
19
18
18
1.89
23414--23527
28
4.0
28
82
8
149
28
25
19
27
1.99
23420--23527
58
1.9
56
86
7
155
27
25
20
26
1.99
30591--30911
162
2.0
161
93
0
552
37
21
7
33
1.82
31702--31743
20
2.1
20
86
0
57
26
4
4
64
1.33
32700--32794
41
2.3
41
88
0
136
30
16
17
34
1.93
34064--34274
51
4.1
51
94
1
343
29
2
54
13
1.51
34345--34464
19
6.3
19
70
11
59
32
1
1
64
1.13
34417--34460
22
2.0
23
90
4
72
34
0
2
63
1.07
34416--34474
22
2.8
21
80
14
68
33
0
3
62
1.12
34367--34482
51
2.2
53
80
8
132
33
1
1
62
1.15
35368--35411
23
1.9
23
81
9
54
43
27
2
27
1.67
36929--36956
13
2.2
13
100
0
56
46
0
17
35
1.49
37016--37056
20
2.2
19
86
8
57
29
0
4
65
1.13
37166--37214
23
2.1
23
96
0
89
36
22
2
38
1.66
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
37418--37451
12
2.7
13
90
4
52
70
2
2
23
1.15
38572--38704
50
2.6
50
80
7
144
21
26
23
28
1.99
44685--45082
199
2.0
199
92
1
656
28
26
14
30
1.95
51191--51372
40
4.7
40
80
10
198
25
22
27
24
2.00
51191--51372
77
2.3
80
82
8
205
25
22
27
24
2.00
51244--51405
79
2.1
76
81
7
184
27
20
27
24
1.99

Tables:   1

The End!