Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold478
Parameters: 2 7 7 80 10 50 1000
Length:  38178

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3747--3814
33
2.1
33
97
0
127
32
20
10
36
1.86
4432--4507
38
2.0
39
97
2
145
42
21
10
26
1.85
6169--6430
39
6.7
40
87
7
337
25
22
27
24
2.00
14112--14334
39
5.7
40
84
8
257
25
21
27
25
2.00
14112--14334
79
2.8
80
82
11
262
25
21
27
25
2.00
14164--14367
79
2.6
79
83
8
213
26
21
27
24
1.99
18204--18241
16
2.4
16
86
4
51
39
18
0
42
1.50
18204--18247
15
2.9
15
80
6
52
36
15
0
47
1.46
23370--23643
48
5.7
47
81
2
172
27
27
17
26
1.98
26176--26289
44
2.6
44
84
2
151
23
20
25
30
1.98
27038--27106
27
2.6
27
76
2
68
28
30
18
21
1.97
27387--27477
27
3.4
27
78
3
96
38
19
18
23
1.93
27466--27526
22
2.7
23
77
7
63
40
24
18
16
1.90
27876--27937
27
2.3
27
94
0
106
33
16
11
38
1.84
27891--28207
54
5.9
53
81
7
311
31
11
18
39
1.86
27891--28207
81
3.9
80
79
6
318
31
11
18
39
1.86
27891--28214
27
12.0
27
81
5
280
30
11
19
38
1.86
30389--30566
27
6.6
27
83
3
205
26
15
28
29
1.96
30390--30545
82
1.9
81
88
3
233
26
15
28
29
1.96
30386--30566
82
2.2
81
83
2
229
27
15
27
29
1.96

Tables:   1

The End!