Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2374
Parameters: 2 7 7 80 10 50 1000
Length:  53785

Tables:   1   

This is table  1  of  1  ( 24 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1008--1063
16
3.4
16
83
11
53
25
10
5
58
1.52
1110--1137
13
2.2
13
100
0
56
21
0
7
71
1.09
9862--9924
21
3.0
21
88
6
83
31
33
6
28
1.82
10283--10350
16
4.2
16
96
0
127
26
0
36
36
1.57
10567--10608
15
2.7
16
82
14
52
52
2
0
45
1.13
10576--10617
15
2.9
15
82
10
52
52
0
0
47
1.00
10686--10737
15
3.6
15
80
12
56
53
1
0
44
1.11
10570--11009
119
3.7
120
98
0
841
50
5
1
42
1.34
10805--10856
15
3.6
15
80
12
56
53
1
0
44
1.11
10663--10984
44
7.9
43
66
19
149
51
5
1
41
1.34
13287--13320
12
2.7
13
90
4
52
58
8
32
0
1.29
13365--13401
19
1.9
19
100
0
74
48
10
40
0
1.38
22970--23000
12
2.6
12
100
0
62
25
16
12
45
1.83
35073--35111
20
1.9
21
89
5
62
23
28
12
35
1.91
35501--35526
13
2.0
13
100
0
52
46
0
7
46
1.31
39054--39118
20
3.3
19
73
16
51
38
16
21
23
1.93
40892--40954
33
1.9
33
84
12
85
12
26
6
53
1.62
41024--41080
17
3.3
17
76
13
62
5
15
7
71
1.25
40969--41083
6
18.7
6
68
12
63
6
17
3
73
1.18
42158--42226
11
5.8
11
72
20
50
15
7
2
73
1.17
42159--42226
12
5.6
12
77
17
61
14
7
2
75
1.14
42096--42177
30
2.8
28
77
18
78
8
15
4
70
1.29
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
43799--43863
20
3.3
19
73
16
51
38
16
21
23
1.93
47075--47108
14
2.4
14
100
0
68
50
20
11
17
1.77

Tables:   1

The End!