Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold505
Parameters: 2 7 7 80 10 50 1000
Length:  53672

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4544--6009
161
9.1
160
77
11
1016
47
9
12
30
1.73
5355--5986
315
2.0
313
85
4
853
46
10
13
30
1.76
6202--6260
29
2.0
29
100
0
118
45
3
23
27
1.68
12872--13029
40
3.9
40
83
1
190
25
20
17
36
1.95
12855--13029
81
2.1
82
82
1
208
23
20
20
36
1.95
17039--17071
13
2.6
13
90
4
50
39
0
18
42
1.50
17937--17989
13
3.9
13
78
9
61
22
18
33
24
1.97
17936--17995
28
2.1
28
96
0
111
23
16
33
26
1.96
17948--18026
28
2.8
28
82
3
88
22
16
30
30
1.96
22501--23967
164
9.1
164
78
8
1255
47
9
12
30
1.73
24160--24218
29
2.0
29
100
0
118
45
3
23
27
1.68
30833--30989
40
3.9
40
83
3
190
25
21
17
35
1.95
34999--35031
13
2.6
13
90
4
50
39
0
18
42
1.50
35897--35949
13
3.9
13
78
9
61
22
18
33
24
1.97
35896--35955
28
2.1
28
96
0
111
23
16
33
26
1.96
35908--35986
28
2.8
28
82
3
88
22
16
30
30
1.96
40793--42259
164
9.1
164
78
8
1264
47
9
12
30
1.73
42452--42510
29
2.0
29
100
0
118
45
3
23
27
1.68
49123--49280
40
3.9
40
83
1
190
25
20
17
36
1.95
49106--49280
81
2.1
82
82
1
208
23
20
20
36
1.95
53286--53318
13
2.6
13
90
4
50
39
0
18
42
1.50

Tables:   1

The End!