Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold884
Parameters: 2 7 7 80 10 50 1000
Length:  53483

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8465--8588
43
2.9
43
86
2
169
24
29
18
28
1.98
8946--9011
13
5.1
13
81
0
87
31
6
25
36
1.81
19730--19774
3
15.3
3
95
4
83
35
0
0
64
0.94
21734--21779
17
2.7
17
75
0
56
36
6
10
45
1.65
22487--22528
17
2.4
18
80
7
52
28
11
11
47
1.76
22553--22864
156
2.0
156
99
0
615
30
9
15
44
1.79
23119--23164
21
2.2
21
96
0
83
58
6
13
21
1.57
26008--26041
14
2.4
14
95
0
59
38
0
11
50
1.39
27588--27642
26
2.2
25
83
3
65
29
1
5
63
1.27
29834--29865
16
2.0
17
88
11
50
75
0
6
18
1.01
33539--33578
3
13.7
3
94
5
73
35
0
0
65
0.93
34109--34234
44
2.8
45
80
1
137
30
19
23
26
1.98
35674--35707
3
11.7
3
93
6
61
35
0
0
64
0.94
37609--37654
17
2.7
17
75
0
56
36
6
10
45
1.65
37994--38057
30
2.2
29
83
8
76
51
3
7
37
1.47
38260--38309
17
2.7
20
78
18
70
10
0
44
46
1.37
42888--42937
17
2.7
20
78
18
70
10
0
44
46
1.37
43885--43926
17
2.4
18
80
7
52
28
11
11
47
1.76
44362--44407
21
2.2
21
96
0
83
58
6
13
21
1.57

Tables:   1

The End!