Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2820
Parameters: 2 7 7 80 10 50 1000
Length:  51359

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3195--3228
17
2.0
17
94
0
59
44
50
0
5
1.26
7826--7859
17
2.0
17
94
0
59
44
50
0
5
1.26
9064--9181
44
2.7
44
93
2
193
50
10
23
15
1.74
11691--11735
24
1.9
23
86
4
63
51
0
2
46
1.13
14618--14669
23
2.2
24
77
16
56
42
0
13
44
1.44
16826--16859
15
2.3
15
89
0
50
17
14
8
58
1.61
18765--18885
62
2.0
62
100
0
242
41
21
4
32
1.74
20158--20213
18
3.1
17
75
25
53
83
7
7
1
0.86
20158--20211
13
4.3
13
79
9
51
83
7
7
1
0.88
20643--20713
7
9.9
7
74
17
56
78
2
16
1
0.94
20643--20713
22
3.3
21
82
4
79
78
2
16
1
0.94
21808--22620
100
8.2
100
82
5
968
30
22
21
26
1.99
21807--22607
200
4.0
200
91
1
1241
29
21
21
26
1.99
22626--23292
84
7.9
84
91
3
1031
33
22
21
22
1.97
22629--23416
84
9.4
82
88
5
898
34
22
20
22
1.97
22629--23424
168
4.7
168
87
7
993
34
22
20
22
1.97
22626--23416
252
3.1
252
87
7
1067
34
22
20
22
1.97
25055--25124
22
3.0
22
73
17
61
35
12
0
51
1.40
25513--25546
15
2.3
15
89
0
50
17
14
8
58
1.61
44587--44621
16
2.2
16
100
0
70
31
25
17
25
1.97
48630--48679
24
2.2
23
89
7
75
26
22
10
42
1.84
48636--48682
24
2.0
24
100
0
94
25
17
10
46
1.79

Tables:   1

The End!