Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold3572
Parameters: 2 7 7 80 10 50 1000
Length:  49480

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3916--3940
7
3.6
7
100
0
50
56
0
0
44
0.99
4340--4376
17
2.2
18
85
9
51
51
0
0
48
1.00
9094--9129
17
2.1
17
100
0
72
50
5
11
33
1.61
12358--12391
8
4.2
8
84
0
50
38
0
11
50
1.39
12650--12794
75
1.9
75
80
5
168
33
4
17
45
1.67
13108--13261
69
2.2
71
87
5
215
31
10
15
42
1.81
20405--20545
75
1.9
75
80
5
169
32
4
19
43
1.70
20627--20729
41
2.5
41
80
0
98
30
16
21
32
1.95
22131--22325
50
3.9
50
87
0
255
25
22
30
22
1.99
31983--32017
18
2.0
18
88
5
54
14
31
42
11
1.81
33406--33458
27
1.9
28
92
3
90
28
32
24
15
1.95
33372--33739
103
3.6
102
93
2
587
30
29
20
20
1.97
33611--33663
26
2.0
26
96
0
97
28
33
22
15
1.94

Tables:   1

The End!