Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1736
Parameters: 2 7 7 80 10 50 1000
Length:  45589

Tables:   1   

This is table  1  of  1  ( 25 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3783--3815
16
2.1
16
100
0
66
30
12
6
51
1.63
10572--10605
16
2.1
16
88
0
50
17
11
17
52
1.73
12145--12193
24
2.0
24
100
0
98
40
12
20
26
1.87
13773--13803
14
2.2
14
94
0
53
38
32
9
19
1.84
15956--15989
17
2.0
17
94
0
59
38
5
0
55
1.24
15956--15996
17
2.3
17
87
8
55
34
7
0
58
1.26
27680--27817
69
2.0
68
98
1
267
47
1
13
38
1.51
27956--27998
17
2.4
18
85
14
54
32
9
0
58
1.30
30468--30510
22
1.9
22
86
13
61
53
6
0
39
1.28
32704--32739
6
6.0
6
100
0
72
0
50
16
33
1.46
35239--35264
13
2.0
13
100
0
52
38
0
0
61
0.96
35301--35367
29
2.3
29
100
0
134
22
2
10
64
1.39
35309--35357
16
3.2
16
68
26
52
26
4
8
61
1.42
37455--37499
19
2.4
19
85
7
56
26
20
13
40
1.89
40126--40172
8
6.4
8
73
26
50
78
10
0
10
0.96
40127--40165
7
5.7
7
85
14
55
79
10
0
10
0.94
40134--40158
12
2.1
12
100
0
50
84
8
0
8
0.79
40124--40181
19
2.8
19
89
10
80
75
10
1
12
1.11
40124--40172
16
2.8
17
87
12
64
79
10
0
10
0.93
41028--41052
7
3.6
7
100
0
50
76
0
12
12
1.04
42153--42463
45
7.1
44
78
14
288
27
17
25
30
1.97
42154--42409
91
2.9
86
79
15
292
26
17
25
31
1.97
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
42456--42935
127
3.7
130
84
12
628
32
18
22
27
1.97
44742--44810
27
2.6
26
83
2
93
5
2
11
79
1.01
44846--44878
13
2.5
13
95
0
57
30
0
0
69
0.88

Tables:   1

The End!