Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1741
Parameters: 2 7 7 80 10 50 1000
Length:  42583

Tables:   1   

This is table  1  of  1  ( 28 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6895--6956
28
2.2
29
82
8
74
24
11
1
62
1.37
8627--8755
54
2.3
56
83
9
158
60
0
1
37
1.12
8681--8755
18
4.2
18
75
17
66
61
0
2
36
1.10
8679--8749
8
8.1
8
74
12
52
60
0
2
36
1.11
8671--8755
10
9.3
9
75
13
59
62
0
2
35
1.08
8627--8793
28
5.9
28
74
16
123
59
1
3
34
1.25
9074--9126
20
2.7
20
80
11
65
35
1
0
62
1.06
9158--9350
89
2.2
87
84
9
257
35
8
19
36
1.83
9192--9418
89
2.6
87
81
4
222
38
7
19
35
1.79
14205--14273
29
2.4
28
74
11
68
24
20
13
42
1.87
17142--17190
24
2.0
25
84
7
66
40
2
4
53
1.32
18597--18658
28
2.2
29
82
8
74
24
11
1
62
1.37
21595--21710
54
2.1
54
98
0
223
34
18
18
27
1.95
22502--22650
72
2.1
72
93
0
253
26
20
24
29
1.99
24211--24337
61
2.1
61
80
2
139
33
4
14
47
1.65
25645--25823
10
18.5
10
69
15
85
62
1
3
33
1.19
25624--25648
12
2.1
12
100
0
50
68
0
8
24
1.16
25653--25728
27
2.7
27
80
11
82
64
0
1
34
1.02
25619--25778
78
2.1
77
80
9
173
61
0
3
35
1.14
26032--26082
19
2.7
19
78
3
59
27
0
1
70
0.98
26204--26364
89
1.8
88
92
5
272
36
11
18
34
1.86
28726--28762
19
2.0
20
84
10
51
27
27
0
45
1.54
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
34960--35022
28
2.2
29
77
8
67
23
12
1
61
1.39
39842--40082
72
3.3
72
92
0
401
26
19
22
31
1.98
39970--40190
36
6.1
36
67
15
161
25
21
20
32
1.98
39970--40190
108
2.0
108
97
0
415
25
21
20
32
1.98
40078--40465
72
5.3
72
87
8
577
28
20
21
29
1.98
40081--40465
152
2.6
150
90
6
594
28
20
21
29
1.98

Tables:   1

The End!